snpStatsWriter/ChangeLog at master · chr1swallace/snpStatsWriter · GitHub

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2015-06-02  Chris Wallace <chris.wallace@cimr.cam.ac.uk>

	* v1.5-9
	* R/write.R: write.snphap() now uses 'N' for null alleles in nucleotide coding

2014-08-18  Chris Wallace <chris.wallace@cimr.cam.ac.uk>

	* v1.5-8
	* R/write.R: write.impute() now creates sample file too

2014-08-05  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.5-7
	* src/writers.c (write_impute):
	* src/write.R (write.impute): added option to explicitly provide
	rsids, previously assumed to be the colnames() of X

2013-10-21  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.5-6
	* src/writers.c (write_phase): fixed bug in defintion of astr

2013-10-21  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.5-5
	* R/write.R (write.sbams): added write.sbams function

2013-10-14  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.5-4
	Removed inst/doc/vignette.Rmd, use vignettes/vignette.Rmd as per
	Brian Ripley's email.

2013-05-14  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.5-3
	added README.md to .Rbuildignore
	 Modified write.mach to allow specification of non-default SNP names

2013-05-14  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.5
	added vignette

2013-04-08  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.04
	editted write.snphap function to enforce snphap default allele
	coding, and recode indels where necessary.

2013-03-20  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.03
	added write.snphap function

2013-01-28  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.02
	updated write_mach to allow specification of pedigree, member etc
	rather than assuming all samples are unrelated

2012-12-11  Chris Wallace  <chris.wallace@cimr.cam.ac.uk>

	* v1.01
	added "\r\n" eol characters on Windows platforms