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fix(mlflow): fix KeyError in error message for missing environment variables#894

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HCookie merged 7 commits intomainfrom
copilot/fix-issue-622
Feb 17, 2026
Merged

fix(mlflow): fix KeyError in error message for missing environment variables#894
HCookie merged 7 commits intomainfrom
copilot/fix-issue-622

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Copilot AI commented Feb 13, 2026

Description

Fixes a bug where the error message handler itself throws a KeyError when attempting to inform users about missing TMPDIR/SCRATCH environment variables.

What problem does this change solve?

Bugfix: The error handler accessed os.environ["SCRATCH"] and os.environ["TMPDIR"] directly when checking if they exist, causing a KeyError instead of showing the intended error message to the user.

What issue or task does this change relate to?

Closes #622

Additional notes

Changes:

Minimal fix to the error message formatting in export_log_output_file_path():

  • Changed os.environ["TMPDIR"]os.getenv("TMPDIR", "not set")
  • Changed os.environ["SCRATCH"]os.getenv("SCRATCH", "not set")

Before:

if not os.getenv("TMPDIR") and not os.getenv("SCRATCH"):
    error_msg = "Please set one of those variables TMPDIR:{} or SCRATCH:{} to proceed.".format(
        os.environ["SCRATCH"],  # KeyError if not set!
        os.environ["TMPDIR"],   # KeyError if not set!
    )
    raise ValueError(error_msg)

After:

if not os.getenv("TMPDIR") and not os.getenv("SCRATCH"):
    error_msg = "Please set one of those variables TMPDIR:{} or SCRATCH:{} to proceed.".format(
        os.getenv("TMPDIR", "not set"),  # Safe with default value
        os.getenv("SCRATCH", "not set"),  # Safe with default value
    )
    raise ValueError(error_msg)

This is a minimal 2-line change that fixes the issue without unnecessary refactoring.

As a contributor to the Anemoi framework, please ensure that your changes include unit tests, updates to any affected dependencies and documentation, and have been tested in a parallel setting (i.e., with multiple GPUs). As a reviewer, you are also responsible for verifying these aspects and requesting changes if they are not adequately addressed. For guidelines about those please refer to https://anemoi.readthedocs.io/en/latest/

By opening this pull request, I affirm that all authors agree to the Contributor License Agreement.


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@github-project-automation github-project-automation bot moved this to To be triaged in Anemoi-dev Feb 13, 2026
@HCookie HCookie moved this from To be triaged to Now In Progress in Anemoi-dev Feb 13, 2026
Fixed issue #622 where the error message in export_log_output_file_path()
would throw a KeyError when TMPDIR and SCRATCH environment variables are not set.
Changed os.environ[] to os.getenv() with default values in the error message.

Co-authored-by: HCookie <48088699+HCookie@users.noreply.github.com>
Copilot AI changed the title [WIP] Fix issue 622 in Anemoi Core Fix KeyError in mlflow_sync error message for missing environment variables Feb 13, 2026
Copilot AI requested a review from HCookie February 13, 2026 16:00
Copilot AI and others added 2 commits February 13, 2026 16:06
Remove module-level call to export_log_output_file_path() and initialize
temp file only when sync() method is called. This avoids side effects at
import time and prevents errors when environment variables are not set
until the functionality is actually needed.

Changes:
- Removed module-level temp = export_log_output_file_path() call
- Initialize temp file at the start of sync() method
- Added outer try-finally block to ensure cleanup on early returns
- Updated close_and_clean_temp() to accept temp as parameter
- Fixed line length linting issues

Co-authored-by: HCookie <48088699+HCookie@users.noreply.github.com>
Extract _cleanup_temp_env_vars() helper function to avoid code duplication
between close_and_clean_temp() and the outer finally block.
Improve test documentation to acknowledge testing limitations.

Co-authored-by: HCookie <48088699+HCookie@users.noreply.github.com>
Copilot AI changed the title Fix KeyError in mlflow_sync error message for missing environment variables refactor(mlflow): fix error message KeyError and lazy-initialize temp file Feb 13, 2026
Major improvements:
1. Replaced nested try-finally blocks with context manager pattern (mlflow_temp_log_file)
2. Eliminated deep nesting and code duplication
3. Added proper comprehensive tests that actually validate functionality
4. All pre-commit hooks pass (black, isort, ruff, docsig, etc.)

Changes:
- Created mlflow_temp_log_file() context manager for automatic cleanup
- Simplified sync() method - no more deep nesting
- Removed duplicated cleanup logic
- Updated close_and_clean_temp() signature (removed temp parameter)
- Added 6 comprehensive tests covering all scenarios:
  * Context manager with TMPDIR
  * Context manager with SCRATCH
  * Missing env vars (KeyError fix validation)
  * Cleanup on exception
  * Environment variable cleanup
  * Artifact cleanup (server2server true/false)

The refactoring follows Python best practices using context managers
for resource management instead of manual try-finally blocks.

Co-authored-by: HCookie <48088699+HCookie@users.noreply.github.com>
Copilot AI changed the title refactor(mlflow): fix error message KeyError and lazy-initialize temp file refactor(mlflow): fix KeyError in error message and eliminate module-level side effects Feb 13, 2026
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HCookie commented Feb 13, 2026

So, copilot has done some strange things here....

@github-project-automation github-project-automation bot moved this from Now In Progress to Under Review in Anemoi-dev Feb 13, 2026
Simplified fix for issue #622. The error message was using os.environ[]
which throws KeyError when the variables don't exist. Changed to use
os.getenv() with default values instead.

Reverted overcomplicated refactoring and tests - this is the minimal fix.

Co-authored-by: HCookie <48088699+HCookie@users.noreply.github.com>
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Copilot AI commented Feb 13, 2026

So, copilot has done some strange things here....

Agreed - I over-engineered the solution. Reverted to a minimal fix that just addresses the KeyError issue. Commit b30241a.

Copilot AI changed the title refactor(mlflow): fix KeyError in error message and eliminate module-level side effects fix(mlflow): fix KeyError in error message for missing environment variables Feb 13, 2026
Copilot AI requested a review from HCookie February 13, 2026 17:32
@HCookie HCookie requested a review from Copilot February 13, 2026 17:44
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Pull request overview

This PR fixes a bug in the error message handler for export_log_output_file_path() in mlflow_sync.py. When neither TMPDIR nor SCRATCH environment variables are set, the error handler was attempting to access these variables directly using os.environ[], which itself raised a KeyError instead of displaying the intended helpful error message to the user.

Changes:

  • Fixed KeyError in error message formatting by using os.getenv() with default values instead of direct dictionary access
  • Changed error message construction to safely handle missing environment variables

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@HCookie HCookie requested a review from anaprietonem February 17, 2026 13:47
@HCookie HCookie marked this pull request as ready for review February 17, 2026 13:57
@HCookie HCookie added the ATS Approval Not Needed No approval needed by ATS label Feb 17, 2026
@github-actions github-actions bot added the bug Something isn't working label Feb 17, 2026
@HCookie HCookie merged commit 77ca1ae into main Feb 17, 2026
13 checks passed
@HCookie HCookie deleted the copilot/fix-issue-622 branch February 17, 2026 14:07
@github-project-automation github-project-automation bot moved this from Under Review to Done in Anemoi-dev Feb 17, 2026
@DeployDuck DeployDuck mentioned this pull request Feb 17, 2026
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mlflow_sync error message throws error itself

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