File tree Expand file tree Collapse file tree 1 file changed +28
-0
lines changed
Expand file tree Collapse file tree 1 file changed +28
-0
lines changed Original file line number Diff line number Diff line change @@ -23,6 +23,34 @@ Seqfu can be easily installed via Miniconda:
2323conda install -y -c conda-forge -c bioconda " seqfu>1.10"
2424```
2525
26+ ### Build from source
27+
28+ Building the Nim programs alone would just require a ` nimble build ` ,
29+ but this would leave out some other utilities.
30+ There is a ` make ` (Makefile) building system. Since Nim is not so popular,
31+ I describe a full installation:
32+
33+ ``` bash
34+ # Do you have building tools? You will need C and make, in Ubuntu:
35+ sudo apt install build-essential
36+
37+ # Install zlib
38+ sudo apt install zlib1g-dev
39+
40+ # Install Nim 2.0
41+ curl https://nim-lang.org/choosenim/init.sh -sSf | sh
42+
43+ # Clone this repo
44+ git clone https://github.com/telatin/seqfu2
45+
46+ # Compile and test
47+ cd seqfu2
48+ make
49+ make test
50+
51+ # All binaries are in bin (move them in a location in your $PATH)
52+ ```
53+
2654## 📰 Citation
2755
2856Telatin A, Fariselli P, Birolo G.
You can’t perform that action at this time.
0 commit comments