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feature: MMTF Parser Improvements + MMTF Export#119

Merged
a-r-j merged 8 commits intoBioPandas:mainfrom
a-r-j:main
Apr 1, 2023
Merged

feature: MMTF Parser Improvements + MMTF Export#119
a-r-j merged 8 commits intoBioPandas:mainfrom
a-r-j:main

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@a-r-j a-r-j commented Mar 29, 2023

Code of Conduct

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Description

Fixes some less than robust parsing decisions I made in MMTF parsing. Also adds ability to write MMTF files.

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Pull Request Checklist

  • Added a note about the modification or contribution to the ./docs/sources/CHANGELOG.md file (if applicable)
  • Added appropriate unit test functions in the ./biopandas/*/tests directories (if applicable)
  • Modify documentation in the corresponding Jupyter Notebook under biopandas/docs/sources/ (if applicable)
  • Ran PYTHONPATH='.' pytest ./biopandas -sv and make sure that all unit tests pass (for small modifications, it might be sufficient to only run the specific test file, e.g., PYTHONPATH='.' pytest ./biopandas/classifier/tests/test_stacking_cv_classifier.py -sv)
  • Checked for style issues by running flake8 ./biopandas

@a-r-j a-r-j merged commit 0f5f10a into BioPandas:main Apr 1, 2023
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