Manuscript publication version

This tag marks the final version that is approved by the review panel upon the publication of the manuscript.

Revised Publication Synced Version

1.0.5

Bump version to 1.0.5

Publication Synced Version

1. Update version number
2. Update Mapping Rate estimation
3. Share realReadStart/End between functions
4. Updated SetSamRecord flank length
5. Updated PCR dup rate estimation
6. Update readme.md
7. Activate IsDuplicated function
8. Adjust warning messages
9. Fix IS output error
10. Adjust reads buffer size
11. Update visualization functions
12. Reformat code

Major update on readme and tutorial

1.0.3

1. fix readme typo

hot fix on several bugs

1.0.2b

1. fix a bug in depth plot

Important update

1. Refined target region related functions
2. Enable thread pool scheduling
3. Make pipeline compatible in both GNU and BSD platform
4. Automatically generate html report via knitr
5. Pruned unused large files

First Official Release

1.0.0

1.update readme.md