STARmap PLUS-analysis

Scripts for the 'Integrative in situ mapping of single-cell transcriptional states and tissue histopathology in an Alzheimer disease model'.

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Other Info

Citation

Please cite our paper if you find our work useful.:

Zeng, H., Huang, J., Zhou, H., Meilandt, W.J., Dejanovic, B., Zhou, Y., Bohlen, C.J., Lee, S.H., Ren, J., Liu, A. and Tang, Z., 2023. Integrative in situ mapping of single-cell transcriptional states and tissue histopathology in a mouse model of Alzheimer’s disease. Nature Neuroscience, 26(3), pp.430-446.

Related Dataset

The related datasets can be found:

1. Single Cell Portal
2. Zenodo - Gene expression dataset

• Please use the most recent version of the dataset.

Contact

Contact us at jiahao@broadinstitute.org if you have any issues.

Contributor

Jiahao Huang, Haowen Zhou, Hu Zeng