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@Nic-Ma Nic-Ma commented Apr 12, 2022

Fixes #4084 .

Description

This PR added kwargs support for Tensor.to() in engines, it can help more args like channel_last memory format, etc.

Status

Ready

Types of changes

  • Non-breaking change (fix or new feature that would not break existing functionality).
  • Breaking change (fix or new feature that would cause existing functionality to change).
  • New tests added to cover the changes.
  • Integration tests passed locally by running ./runtests.sh -f -u --net --coverage.
  • Quick tests passed locally by running ./runtests.sh --quick --unittests --disttests.
  • In-line docstrings updated.
  • Documentation updated, tested make html command in the docs/ folder.

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Nic-Ma commented Apr 12, 2022

/black

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Nic-Ma commented Apr 12, 2022

/build

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Nic-Ma commented Apr 12, 2022

/black

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Nic-Ma commented Apr 12, 2022

/black

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Nic-Ma commented Apr 12, 2022

/build

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Nic-Ma commented Apr 12, 2022

/build

@Nic-Ma Nic-Ma marked this pull request as ready for review April 12, 2022 21:59
@Nic-Ma Nic-Ma changed the title [WIP] 4084 Add kwargs for Tensor.to() in engines 4084 Add kwargs for Tensor.to() in engines Apr 12, 2022
@Nic-Ma Nic-Ma requested review from ericspod, rijobro and wyli April 12, 2022 21:59
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Nic-Ma commented Apr 13, 2022

/black

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Nic-Ma commented Apr 13, 2022

/build

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Nic-Ma commented Apr 13, 2022

/integration-test

@wyli wyli merged commit f8c2655 into Project-MONAI:dev Apr 13, 2022
Can-Zhao added a commit to Can-Zhao/MONAI that referenced this pull request May 10, 2022
Add padding to filter to ensure same size after anti-aliasing

Use replicate padding insteadof zero padding to avoid artifacts for non-zero boundary

Reuse GaussianSmooth

4073 Enhance DynUNet doc-strings (Project-MONAI#4102)

* Fix doc strings error

Signed-off-by: Yiheng Wang <[email protected]>

* remove duplicate places

Signed-off-by: Yiheng Wang <[email protected]>

4105 drops pt16 support (Project-MONAI#4106)

* update sys req

Signed-off-by: Wenqi Li <[email protected]>

* temp test

Signed-off-by: Wenqi Li <[email protected]>

* update code for torch>=1.7

Signed-off-by: Wenqi Li <[email protected]>

* temp tests

Signed-off-by: Wenqi Li <[email protected]>

* fixes tests

Signed-off-by: Wenqi Li <[email protected]>

* autofix

Signed-off-by: Wenqi Li <[email protected]>

* fixes import

Signed-off-by: Wenqi Li <[email protected]>

* clear cache

Signed-off-by: Wenqi Li <[email protected]>

* update based on comments

Signed-off-by: Wenqi Li <[email protected]>

* remove temp cmd

Signed-off-by: Wenqi Li <[email protected]>

Make `pixelshuffle` scriptable (Project-MONAI#4109)

* Update the existing functionality to comply with the `torchscript.jit.script` function.

Signed-off-by: Ramon Emiliani <[email protected]>

meta tensor (Project-MONAI#4077)

* meta tensor

Signed-off-by: Richard Brown <[email protected]>

4084 Add kwargs for `Tensor.to()` in engines (Project-MONAI#4112)

* [DLMED] add kwargs for to() API

Signed-off-by: Nic Ma <[email protected]>

* [MONAI] python code formatting

Signed-off-by: monai-bot <[email protected]>

* [DLMED] fix typo

Signed-off-by: Nic Ma <[email protected]>

* [DLMED] fix flake8

Signed-off-by: Nic Ma <[email protected]>

* [DLMED] update according to comments

Signed-off-by: Nic Ma <[email protected]>

Co-authored-by: monai-bot <[email protected]>

fixes pytorch version tests (Project-MONAI#4127)

Signed-off-by: Wenqi Li <[email protected]>

update meta tensor api (Project-MONAI#4131)

* update meta tensor api

Signed-off-by: Wenqi Li <[email protected]>

* update based on comments

Signed-off-by: Wenqi Li <[email protected]>

runtests.sh isort (Project-MONAI#4134)

Signed-off-by: Richard Brown <[email protected]>

update citation (Project-MONAI#4133)

Signed-off-by: Wenqi Li <[email protected]>

`ToMetaTensor` and `FromMetaTensor` transforms (Project-MONAI#4115)

to and from meta

no skip if before pytorch 1.7 (Project-MONAI#4139)

* no skip if before pytorch 1.7

Signed-off-by: Richard Brown <[email protected]>

* fix

Signed-off-by: Richard Brown <[email protected]>

* fix

Signed-off-by: Richard Brown <[email protected]>

[DLMED] fix file name in meta (Project-MONAI#4145)

Signed-off-by: Nic Ma <[email protected]>

4116 Add support for advanced args of AMP (Project-MONAI#4132)

* [DLMED] fix typo in bundle scripts

Signed-off-by: Nic Ma <[email protected]>

* [DLMED] add support for AMP args

Signed-off-by: Nic Ma <[email protected]>

* [MONAI] python code formatting

Signed-off-by: monai-bot <[email protected]>

* [DLMED] fix flake8

Signed-off-by: Nic Ma <[email protected]>

Co-authored-by: monai-bot <[email protected]>

New wsireader (Project-MONAI#4147)

`MetaTensor`: collate; decollate; dataset; dataloader; out=; indexing and iterating across batches (Project-MONAI#4137)

`MetaTensor`: collate; decollate; dataset; dataloader; out=; indexing and iterating across batches (Project-MONAI#4137)
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Add support for channel-last forward in engines

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