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Update data model template repository with the usage of Curator + Synapse Python Client#43

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thomasyu888 wants to merge 36 commits intomainfrom
tyu-refresh
Open

Update data model template repository with the usage of Curator + Synapse Python Client#43
thomasyu888 wants to merge 36 commits intomainfrom
tyu-refresh

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@thomasyu888 thomasyu888 commented Feb 22, 2026

The template data model repository was still using Schematic and was using old data model rules. Here I updated to use a new data model containing new validation rule columns along with a refreshed readme on recommended best practices

@thomasyu888 thomasyu888 changed the title Refresh template data model repository Update data model template repository with the usage of Curator + Synapse Python Client Feb 22, 2026
@thomasyu888 thomasyu888 marked this pull request as ready for review February 22, 2026 08:00

3. `config.yml`: The schematic-compatible configuration file, which allows users to specify values for application-specific keys (e.g., path to Synapse configuration file) and project-specific keys (e.g., Synapse fileview for community project). A description of what the various keys in this file represent can be found in the [Fill in Configuration File(s)](https://sage-schematic.readthedocs.io/en/develop/README.html#fill-in-configuration-file-s) section of the schematic [docs](https://sage-schematic.readthedocs.io/en/develop/index.html). No newline at end of file
[example.model.csv](./example.model.csv) is a CSV representation of the example data model.

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Add linkml as a data model standard but need to link out to it

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