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I will wait for #321 to merge first, cuz I need to modify the CI infrastructure for this PR. |
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* unified configure flags * support editable wheel install * make doxygen-awesome-css a submodule * do not auto-download doxygen * better handle notebook tracking * include notebooks in documentation * refactor documentation build process * adapt github actions to use new doc build scripts
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Documentation preview: https://applied-material-modeling.github.io/neml2/pr-preview/323 |
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This pull request introduces several structural and configuration changes to the build system, focusing on simplifying the build options, improving Python integration, and updating documentation and notebook handling. The most notable changes are the replacement of the old
runnerand documentation options with a unifiedtoolsoption, improved handling of editable Python wheel installs, and enhanced support for Jupyter notebooks and documentation workflows.Build system and configuration changes:
NEML2_RUNNER,NEML2_PYBIND, andNEML2_DOCoptions withNEML2_TOOLSandNEML2_WHEEL, consolidating utility binaries and Python wheel builds under new options. UpdatedCMakeLists.txtandCMakePresets.jsonaccordingly. [1] [2] [3] [4]Documentation and notebook workflow improvements:
doxygen-awesome-cssand removed internal Doxygen download logic, shifting documentation build processes to external scripts and workflows. [1] [2].gitattributesto disable diff for.ipynbfiles and introduced.jupytext.tomland.pre-commit-config.yamlto synchronize Jupyter notebooks with Markdown using Jupytext. [1] [2] [3]CI workflow updates:
These changes streamline the build and documentation process, improve Python integration, and enhance notebook management for development and CI.