protect collect rnaseqmetrics from pair orientation assert#2027
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kockan merged 2 commits intobroadinstitute:masterfrom Nov 13, 2025
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protect code from calling getPairOrientation() when references of read and mate are not equal
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I can't seem to hit the "merge" button...please be my guest @kockan |
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Description
fixes #2026
Protect code from calling getPairOrientation() when references of read and mate are not equal (as that now throws an exception)
Also added similar protection to CollectInsertSizeMetrics
Tests added.