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GSEA_postgwas_with_distance_trimming_040414ERD.R
GSEA_postgwas_with_distance_trimming_040414ERD.R
 
 
README.md
README.md
 
 
analyze_GSEA_results_101614ERD.R
analyze_GSEA_results_101614ERD.R
 
 
analyze_PVE_bacteria_GWAS_052614ERD.R
analyze_PVE_bacteria_GWAS_052614ERD.R
 
 
analyze_age_and_sex_associations_GEMMA_covs_regressed_out_052014ERD.R
analyze_age_and_sex_associations_GEMMA_covs_regressed_out_052014ERD.R
 
 
analyze_heritabilities_from_GTAM_061914ERD.R
analyze_heritabilities_from_GTAM_061914ERD.R
 
 
generate_GEMMA_age_and_sex_files_and_script_regressing_covs_052014ERD.R
generate_GEMMA_age_and_sex_files_and_script_regressing_covs_052014ERD.R
 
 
generate_GEMMA_script_bacteria_052214ERD.R
generate_GEMMA_script_bacteria_052214ERD.R
 
 
generate_GEMMA_script_diversity_061914ERD.R
generate_GEMMA_script_diversity_061914ERD.R
 
 
generate_GSEA_submission_script_sig_only_070114ERD.R
generate_GSEA_submission_script_sig_only_070114ERD.R
 
 
generate_diversity_tables_061914ERD.R
generate_diversity_tables_061914ERD.R
 
 
generate_diversity_tables_seasons_individually_061914ERD.R
generate_diversity_tables_seasons_individually_061914ERD.R
 
 
generate_script_to_pull_SNP_info_for_eQTL-like_plots_062514ERD.R
generate_script_to_pull_SNP_info_for_eQTL-like_plots_062514ERD.R
 
 
maurano_enrichment_script_with_FET_062614ERD.R
maurano_enrichment_script_with_FET_062614ERD.R
 
 
plot_Maurano_enrichment_plots_single_cell_type_single_panels_FET_063014ERD.R
plot_Maurano_enrichment_plots_single_cell_type_single_panels_FET_063014ERD.R
 
 
set_up_heritabilites_for_GTAM_061814ERD.R
set_up_heritabilites_for_GTAM_061814ERD.R
 
 
trim_prune_qqnorm_initial_bacteria_for_QTL_analysis_fecal_averaged_052014ERD.R
trim_prune_qqnorm_initial_bacteria_for_QTL_analysis_fecal_averaged_052014ERD.R
 
 
trim_prune_qqnorm_initial_bacteria_for_QTL_analysis_fecal_seasons_individually_052014ERD.R
trim_prune_qqnorm_initial_bacteria_for_QTL_analysis_fecal_seasons_individually_052014ERD.R
 
 

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bQTL

This repo contains scripts used in the fecal and nasal Hutterite QTL project.

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This repo contains scripts used in the fecal and nasal Hutterite QTL project.

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