physplitdata

physplitdata is an R package containing all spike data and metadata for

Functional and anatomical specificity in a higher olfactory centre Shahar Frechter, Alexander Shakeel Bates, Sina Tootoonian, Michael-John Dolan, James Manton, Arian Rokkum Jamasb, Johannes Kohl, Davi Bock, Gregory Jefferis https://doi.org/10.7554/eLife.44590

To analyse these data, see the physplit.analysis package documentation.

Install

Straight from github

If you already have physplitdata (or physplit.analysis) loaded then you need to restart R before (or after) installing.

if(!requireNamespace('devtools')) install.packages("devtools")
devtools::install_github("jefferislab/physplitdata")

Clone repo then install

Alternatively, you can also clone the repository to create a local checkout of the source tree of the physplitdata package.

In the shell/terminal

# or wherever
cd ~/mycode
git clone git@github.com:jefferislab/physplitdata.git

In R

if(!requireNamespace('devtools')) install.packages("devtools")
devtools::install("~/mycode/physplitdata")

Use the data

You will probably want to install the https://github.com/jefferislab/physplit.analysis package, even if you just want to export the data

if(!requireNamespace('devtools')) install.packages("devtools")
devtools::install_github("jefferislab/physplit.analysis")

then

library(physplit.analysis)
# try
?physplit.analysis
?heatmap_cor_dist
?create_raw_summary_array