Fix discretization symbolic one hot#22048
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Summary of ChangesHello @bittoby, I'm Gemini Code Assist1! I'm currently reviewing this pull request and will post my feedback shortly. In the meantime, here's a summary to help you and other reviewers quickly get up to speed! This pull request resolves a critical issue where the "Discretization" layer in Keras failed to correctly compute output shapes for symbolic tensors when "output_mode" was set to "one_hot". The fix involves implementing a robust "compute_output_shape" method that accurately determines the output dimensions based on the chosen output mode, ensuring proper model building with Keras's Functional and Sequential APIs. This change also includes comprehensive new tests and a reusable utility for verifying symbolic shape consistency. Highlights
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Code Review
The pull request effectively addresses the symbolic tensor shape computation issue for the Discretization layer, particularly for the one_hot output mode. The introduction of the compute_output_shape method and its integration into compute_output_spec correctly infers the output shapes for symbolic inputs. The added test cases in discretization_test.py provide good coverage for various output modes and ensure consistency between eager and symbolic execution. The new assert_symbolic_shape_consistency utility in test_utils.py is a valuable addition for future testing of preprocessing layers.
| return input_shape | ||
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| # Calculate depth (number of bins) | ||
| depth = len(self.bin_boundaries) + 1 if self.bin_boundaries else self.num_bins |
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The current logic for calculating depth has a potential issue when self.bin_boundaries is an empty list. In Python, an empty list [] evaluates to False in a boolean context. If self.bin_boundaries is [], the expression len(self.bin_boundaries) + 1 if self.bin_boundaries else self.num_bins will incorrectly fall back to self.num_bins. According to the __init__ validation, if bin_boundaries is explicitly provided (even if empty), num_bins would be None, leading to depth being None and causing a runtime error. The intention is likely to use len(self.bin_boundaries) + 1 if self.bin_boundaries is not None, regardless of whether it's empty or not.
| depth = len(self.bin_boundaries) + 1 if self.bin_boundaries else self.num_bins | |
| depth = (len(self.bin_boundaries) + 1) if self.bin_boundaries is not None else self.num_bins |
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hertschuh
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Thank you for working on this bug!
| # For multi_hot and count modes, the behavior is more complex | ||
| # and depends on the backend implementation. For now, we'll use | ||
| # a simplified approach that works for the most common cases. | ||
| # This may need refinement based on actual backend behavior. |
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How is it backend dependent? Can you provide examples?
Replacing the last dimension with "depth" should be correct always.
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Yes, you are right. I just thought of TF fastpath. But as you mentioned, output_shape should always be like above.
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Please remove this comment. It will cause confusion if somebody ever works on it.
| layer_one_hot = layers.Discretization( | ||
| bin_boundaries=[0.0, 1.0, 2.0], output_mode="one_hot" | ||
| ) | ||
| symbolic_input = layers.Input(shape=(3, 4)) |
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Don't use 4 as the value for the last dimension. There are 4 bins, so won't be able to tell if it has actually been replaced with the "depth" value.
Just in general, using unique dimension values is a good approach.
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Sure. I will fix it to unique dimension value. Thanks.
| # Shapes should be consistent (ignoring batch dimension) | ||
| self.assertEqual(eager_output.shape[1:], symbolic_output.shape[1:]) |
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Why do you exclude the batch size in your comparison? The batch size better not change.
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You're absolutely right to question this! I just simply thought. The comment "ignoring batch dimension" is misleading and potentially incorrect. Let me compare the two batch sizes. Symbolic should be None while eager should be an integer.
| def test_compute_output_shape_edge_cases(self): | ||
| """Test edge cases in compute_output_shape to improve coverage.""" | ||
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| # Test with num_bins instead of bin_boundaries | ||
| layer_num_bins = layers.Discretization( | ||
| num_bins=5, output_mode="one_hot" | ||
| ) |
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Using num_bins hardly counts as and "edge case". Create a dedicated test called test_compute_output_shape_num_bins.
| # Test different output modes | ||
| modes_and_shapes = [ | ||
| ("int", (None, 3, 4), (None, 3, 4)), # int mode - no change | ||
| ("one_hot", (None, 3, 4), (None, 3, 4, 3)), # one_hot - add dim | ||
| ("multi_hot", (None, 3, 4), (None, 3, 3)), # multi_hot - replace | ||
| ("count", (None, 3, 4), (None, 3, 3)), # count - replace | ||
| ] | ||
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| for mode, input_shape, expected_shape in modes_and_shapes: | ||
| layer = layers.Discretization( | ||
| bin_boundaries=[0.0, 1.0], output_mode=mode | ||
| ) | ||
| result_shape = layer.compute_output_shape(input_shape) | ||
| self.assertEqual(result_shape, expected_shape) |
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As far as I can tell, this covers exactly the same use cases as test_symbolic_tensor_output_shape.
You know you can use parameterized tests instead of a for loop:
https://github.com/keras-team/keras/blob/master/keras/src/layers/preprocessing/discretization_test.py#L41-L93
keras/src/testing/test_utils.py
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| def assert_symbolic_shape_consistency( | ||
| test_case, layer, input_shape, expected_output_shape=None | ||
| ): |
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This is not used and I don't think we need this. Revert this file.
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@hertschuh Thanks for your great advice. Plz review again. |
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| # For multi_hot and count modes, the behavior is more complex | ||
| # and depends on the backend implementation. For now, we'll use | ||
| # a simplified approach that works for the most common cases. | ||
| # This may need refinement based on actual backend behavior. |
There was a problem hiding this comment.
Please remove this comment. It will cause confusion if somebody ever works on it.
| ) | ||
| self.assertTrue(backend.is_int_dtype(model_call_output.dtype)) | ||
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| def test_symbolic_tensor_output_shape(self): |
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Please make this parameterized exactly like test_compute_output_shape_modes below.
| named_product( | ||
| [ |
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You don't need named_product here since you're specifying the testcase_names. Just do:
@parameterized.named_parameters(
[
{
"testcase_name": "int_mode",
...
| input_shape = (4, 3) | ||
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| for batch_size in batch_sizes: | ||
| with self.subTest(batch_size=batch_size): |
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This works, but use a parameterized test instead. This is where named_product helps:
@parameterized.named_parameters(named_product(batch_size=[1, 3, 5, 10]))
def test_batch_dimension_consistency(self, batch_size):| test_cases = [ | ||
| { |
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Make this a proper parameterized test.
| # Test various num_bins values with one_hot mode | ||
| num_bins_values = [2, 3, 5, 10, 20, 100] | ||
| input_shape = (None, 4, 3) | ||
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| for num_bins in num_bins_values: |
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Make this a parameterized test, follow the batch_size pattern for this one.
| f"Failed for num_bins={num_bins}: expected " | ||
| f"{expected_shape}, got {result_shape}", |
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No need for this, all this information will already be displayed.
| # Test edge case: num_bins=1 | ||
| layer_single_bin = layers.Discretization( | ||
| num_bins=1, output_mode="one_hot" | ||
| ) | ||
| result = layer_single_bin.compute_output_shape((None, 3, 2)) | ||
| expected = (None, 3, 2, 1) | ||
| self.assertEqual(result, expected) |
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No need for special code for this, just add 1 to the list of num_bins above.
| # Test with different input shapes | ||
| input_shapes = [ | ||
| (None, 5), # 2D (batch + 1D data) | ||
| (None, 3, 4), # 3D (batch + 2D data) | ||
| (None, 2, 3, 4), # 4D (batch + 3D data) | ||
| (None, 1, 2, 3, 4), # 5D (batch + 4D data) | ||
| ] | ||
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| layer = layers.Discretization(num_bins=7, output_mode="one_hot") | ||
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| for input_shape in input_shapes: | ||
| with self.subTest(input_shape=input_shape): | ||
| result_shape = layer.compute_output_shape(input_shape) | ||
| expected_shape = input_shape + (7,) # Append depth for one_hot | ||
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| self.assertEqual( | ||
| result_shape, | ||
| expected_shape, | ||
| f"Failed for input shape {input_shape}: expected " | ||
| f"{expected_shape}, got {result_shape}", | ||
| ) |
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I don't think this is needed, you got compute_output_shape well covered.
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@hertschuh I fixed problems. Plz review again. Thanks. |
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@hertschuh I already fixed all what you mentioned. Plz review again. |
hertschuh
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Last nitpicks on the unit tests:
| # Test consistency between eager and symbolic tensors for one_hot mode | ||
| if output_mode == "one_hot": |
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Why not for all? There's nothing special about "one_hot", you can do it for all.
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Yes, there should be all of the modes. Thanks.
| @parameterized.named_parameters( | ||
| named_product(num_bins=[1, 2, 3, 5, 10, 20, 100]) | ||
| ) | ||
| def _test_num_bins_one_hot_mode(self, num_bins): | ||
| """Test various num_bins values with one_hot mode.""" | ||
| input_shape = (None, 4, 3) | ||
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| layer = layers.Discretization(num_bins=num_bins, output_mode="one_hot") | ||
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| result_shape = layer.compute_output_shape(input_shape) | ||
| expected_shape = (None, 4, 3, num_bins) | ||
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| self.assertEqual(result_shape, expected_shape) |
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This is already covered by one_hot_mode_4_bins line 434, you can remove.
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Thanks, I will fix it.
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#hertschuh, thanks to your comments, I found another issue upon multi_hot and count mode and fix the problems. In the previous times, since #22044 issue is about one_hot mode, I only focused on one_hot mode. The issues are about output_shape in multi_hot and count modes and these are slightly different from expectations. I fix the problem, which symbolic tensor output_shape is same to original eager tensor output_shape. |
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hertschuh Thank you. |
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(keras-team#21995) * Implement kron function for OpenVINO backend (keras-team#22000) * Adds support for AWQ (keras-team#21992) * Trigger TPU tests on kokoro label removal rather than addition. (keras-team#22001) * Document complex dtype limitation in ops.correlate (keras-team#21984) * [OpenVINO backend] Fix and enable numpy.rot90 (keras-team#21967) * Only skip TPU excluded tests on TPU. (keras-team#22008) * Improvements to `JaxLayer` and `FlaxLayer` related to RNG handling an… * Fix typo in contrast adjustment method (keras-team#22012) * Fix typo and improve docstring formatting (keras-team#22017) * Implement nansum function in keras.ops (keras-team#21996) * Fix unreliable Orbax checkpoint detection with custom implementation … * Unpin as many Python packages versions as possible. (keras-team#22023) * Allow `CenterCrop` layer to handle dynamic image sizes. (keras-team#22020) * TPU tests now verify that we can detect TPUs and fails it not. (keras-team#22019) * Refactor ExtractPatches to handle both 2D and 3D (keras-team#22013) * Implement argpartition function for OpenVINO backend (keras-team#22025) * Implement logaddexp2 function for OpenVINO backend (keras-team#22026) * Implement nanmin function in keras.ops (keras-team#22040) * Increase test coverage for IntegerLookup layer (keras-team#22022) * feat: Add documentation examples for image preprocessing augmentation… * Fix: activity regularizer not normalized by batch size (keras-team#22021) * Implement ldexp and select ops for OpenVINO backend (keras-team#22042) * Fix: convert deque to list before tf.transpose in keras.ops.quantile … * Fix timedistributed mask validation (keras-team#22039) * Torch backend: allow explicit device selection and guard DirectML usa… * Implement nanmax function in keras.ops (keras-team#22043) * Add bias support for torch's `dot_product_attention`. (keras-team#22045) * Fix incorrect example in `ops.associative_scan` docstring (keras-team#22051) * Add Batch Renormalisation (keras-team#22047) * Implement round and divide_no_nan ops for OpenVINO backend (keras-team#22052) * Add dynamic shape support for torch backend export (keras-team#22041) * Implement vstack func for OpenVINO backend (keras-team#22059) * Implement ptp function for OpenVINO backend (keras-team#22060) * Implement nanmean function in keras.ops (keras-team#22055) * Do not allow external links in HDF5 files. (keras-team#22057) * Fix discretization symbolic one hot (keras-team#22048) * Implement complete Keras-Orbax checkpoint integration (keras-team#22002) * Increase test coverage for StringLookup preprocessing layer (keras-team#22056) * Set mutable to True by default in nnx_metadata (keras-team#22074) * Adds Asymmetric INT4 Sub-Channel Quantization Support (keras-team#22007) * Allow passing variables to a function with `@custom_gradient`. (keras-team#22069) * Disallow TFSMLayer deserialization in safe_mode to prevent external S… * Remove redundant global seed initialization code. (keras-team#22084) * Add `Muon` to the list of all optimizer classes. (keras-team#22083) * Implement tile function for openvino backend (keras-team#22071) * implement nansum ops for openvino backend (keras-team#22078) * Remove `testing.uses_cpu()` and re-implement for JAX. (keras-team#22087) * benchmarks: add RandomRotation tf.data performance benchmark (keras-team#21986) * Fix arctan2 NaN propagation in OpenVINO backend (keras-team#22064) * Validate positive height and width in image resize (keras-team#22079) * Don't skip some JAX linalg tests on JAX. (keras-team#22091) * Implement nanprod function in keras.ops (keras-team#22089) * Increase test coverage for TextVectorization layer (keras-team#22066) * Bump the github-actions group with 2 updates (keras-team#22093) * fix: pytorch onnx export symbolic test (keras-team#22086) * Improvements to `*_uses_gpu` and `*_uses_tpu`. (keras-team#22088) * Implement cross product operation for OpenVINO backend (keras-team#22096) * Fail fast on invalid convolution output shapes during symbolic execut… * Fix Normalization broadcasting for scalar and multidim mean and varia… * Standardize the way tests are skipped based on backend and accelerato… * Don't call `pythonify_logs` within `get_metrics_result`. (keras-team#22107) * Fix gaussian_blur padding calculation for even kernel sizes (keras-team#22054) * Adjust JAX variable initializer jitting criteria. (keras-team#22116) * Exclude conv transpose tests on TPU. (keras-team#22117) * Remove incorrect but dead code in `BaseOptimizer.stateless_apply`. (#… * Implement tensordot operation for OpenVINO backend (keras-team#22098) * Fix bounding box docstring references (keras-team#22110) * feat: add depth_to_space and space_to_depth ops (keras-team#22112) * Fix sparse reshape test with Numpy 2.4. (keras-team#22141) * Fix vocabulary reload corruption caused by trailing newline handling … * Add support for dynamic dimensions in `ops.slice.compute_output_spec`… * Revamp graph validation in `Function.__init__`. (keras-team#22153) * Fix: draw_bounding_boxes float32 to uint8 conversion (keras-team#22129) * Implement dstack function across all backends (keras-team#22120) * Add exp2 operation to OpenVINO backend (keras-team#22131) * Add trunc operation to OpenVINO backend (keras-team#22134) * Fix: add missing validation for output padding < strides (keras-team#22130) * docs: Add guide on resuming training from weight-only checkpoints (#2… * feat(openvino): upgrade opset to opset15 (keras-team#22159) * Fix order-dependent float16/bfloat16 promotion in cast_to_common_dtyp… * Fix TrackedDict constructor to support iterable (key, value) inputs (… * Implement numpy.gcd using Euclidean algorithm for OpenVINO backend (#… * [Keras 3] Refactor ExportArchive to be a dispatcher for different exp… * [Keras 3] Refactor ExportArchive to be a dispatcher for different exp…
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