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Backport PR #12633 on branch maint/1.7 ([BUG] Cross-spectral density missing frequencies) #12634

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Merged
larsoner merged 1 commit into from
May 29, 2024
Merged

Backport PR #12633 on branch maint/1.7 ([BUG] Cross-spectral density missing frequencies) #12634

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1 change: 1 addition & 0 deletions doc/changes/devel/12633.bugfix.rst
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Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
Fix bug where :func:`mne.time_frequency.csd_multitaper`, :func:`mne.time_frequency.csd_fourier`, :func:`mne.time_frequency.csd_array_multitaper`, and :func:`mne.time_frequency.csd_array_fourier` would return cross-spectral densities with the ``fmin`` and ``fmax`` frequencies missing, by `Thomas Binns`_
9 changes: 6 additions & 3 deletions mne/time_frequency/csd.py
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Expand Up @@ -810,9 +810,10 @@ def csd_array_fourier(
n_fft = n_times if n_fft is None else n_fft

# Preparing frequencies of interest
# orig_frequencies = fftfreq(n_fft, 1. / sfreq)
orig_frequencies = rfftfreq(n_fft, 1.0 / sfreq)
freq_mask = (orig_frequencies > fmin) & (orig_frequencies < fmax)
freq_mask = (
(orig_frequencies > 0) & (orig_frequencies >= fmin) & (orig_frequencies <= fmax)
)
frequencies = orig_frequencies[freq_mask]

if len(frequencies) == 0:
Expand Down Expand Up @@ -1013,7 +1014,9 @@ def csd_array_multitaper(

# Preparing frequencies of interest
orig_frequencies = rfftfreq(n_fft, 1.0 / sfreq)
freq_mask = (orig_frequencies > fmin) & (orig_frequencies < fmax)
freq_mask = (
(orig_frequencies > 0) & (orig_frequencies >= fmin) & (orig_frequencies <= fmax)
)
frequencies = orig_frequencies[freq_mask]

if len(frequencies) == 0:
Expand Down
6 changes: 3 additions & 3 deletions mne/time_frequency/tests/test_csd.py
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Expand Up @@ -394,15 +394,15 @@ def _test_fourier_multitaper_parameters(epochs, csd_epochs, csd_array):
fmin=20,
fmax=10,
)
raises(ValueError, csd_epochs, epochs, fmin=20, fmax=20.1)
raises(ValueError, csd_epochs, epochs, fmin=20.11, fmax=20.19)
raises(
ValueError,
csd_array,
epochs._data,
epochs.info["sfreq"],
epochs.tmin,
fmin=20,
fmax=20.1,
fmin=20.11,
fmax=20.19,
)
raises(ValueError, csd_epochs, epochs, tmin=0.15, tmax=0.1)
raises(
Expand Down