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I am attempting to install openmm-tensorflow and am getting a prompt in ccmake about the build type and the CUDA_SDK_ROOT_DIR.
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**CMAKE_BUILD_TYPE** *
CMAKE_INSTALL_PREFIX /usr/local/openmm
CUDA_HOST_COMPILER /usr/bin/cc
**CUDA_SDK_ROOT_DIR** CUDA_SDK_ROOT_DIR-NOTFOUND
CUDA_TOOLKIT_ROOT_DIR /usr/local/cuda-12.2
CUDA_USE_STATIC_CUDA_RUNTIME ON
CUDA_rt_LIBRARY /usr/lib/x86_64-linux-gnu/librt.a
NN_BUILD_CUDA_LIB ON
NN_BUILD_OPENCL_LIB ON
NN_BUILD_PYTHON_WRAPPERS ON
OPENCL_INCLUDE_DIR /usr/include
OPENCL_LIBRARY /usr/lib/x86_64-linux-gnu/libOpenCL.so
OPENMM_DIR /usr/local/openmm
PYTHON_EXECUTABLE /home/jd/mambaforge/envs/openmmtensorflow/bin/python
SWIG_EXECUTABLE /usr/bin/swig
TENSORFLOW_DIR /usr/local
I have configured my environment as the following:
(openmmtensorflow) jd@oban:/code/openmm/openmm_plugins/openmm-tensorflow/build$ conda env export
name: openmmtensorflow
channels:
- nvidia - conda-forge
- omnia
- bioconda
- defaults
- anaconda
- hcc
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- absl-py=2.0.0=pyhd8ed1ab_0
- aiohttp=3.9.1=py311h459d7ec_0
- aiosignal=1.3.1=pyhd8ed1ab_0
- astunparse=1.6.3=pyhd8ed1ab_0
- attrs=23.2.0=pyh71513ae_0
- blinker=1.7.0=pyhd8ed1ab_0
- brotli-python=1.1.0=py311hb755f60_1
- bzip2=1.0.8=hd590300_5
- c-ares=1.25.0=hd590300_0
- ca-certificates=2023.11.17=hbcca054_0
- cached-property=1.5.2=hd8ed1ab_1
- cached_property=1.5.2=pyha770c72_1
- cachetools=5.3.2=pyhd8ed1ab_0
- certifi=2023.11.17=pyhd8ed1ab_0
- cffi=1.16.0=py311hb3a22ac_0
- charset-normalizer=3.3.2=pyhd8ed1ab_0
- click=8.1.7=unix_pyh707e725_0
- cryptography=41.0.7=py311hcb13ee4_1
- cuda-version=11.7=h67201e3_2
- cudatoolkit=11.7.0=hd8887f6_10
- cudnn=8.8.0.121=hcdd5f01_4
- flatbuffers=23.5.26=h59595ed_1
- frozenlist=1.4.1=py311h459d7ec_0
- gast=0.5.4=pyhd8ed1ab_0
- giflib=5.2.1=h0b41bf4_3
- google-auth=2.26.1=pyhca7485f_0
- google-auth-oauthlib=1.0.0=pyhd8ed1ab_1
- google-pasta=0.2.0=pyh8c360ce_0
- grpcio=1.54.3=py311hcafe171_0
- h5py=3.10.0=nompi_py311hebc2b07_101
- hdf5=1.14.3=nompi_h4f84152_100
- icu=73.2=h59595ed_0
- idna=3.6=pyhd8ed1ab_0
- importlib-metadata=7.0.1=pyha770c72_0
- keras=2.13.1=pyhd8ed1ab_0
- keyutils=1.6.1=h166bdaf_0
- krb5=1.21.2=h659d440_0
- ld_impl_linux-64=2.40=h41732ed_0
- libabseil=20230125.3=cxx17_h59595ed_0
- libaec=1.1.2=h59595ed_1
- libblas=3.9.0=20_linux64_openblas
- libcblas=3.9.0=20_linux64_openblas
- libcurl=8.5.0=hca28451_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=hd590300_2
- libexpat=2.5.0=hcb278e6_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=13.2.0=h807b86a_3
- libgfortran-ng=13.2.0=h69a702a_3
- libgfortran5=13.2.0=ha4646dd_3
- libgomp=13.2.0=h807b86a_3
- libgrpc=1.54.3=hb20ce57_0
- libjpeg-turbo=3.0.0=hd590300_1
- liblapack=3.9.0=20_linux64_openblas
- libnghttp2=1.58.0=h47da74e_1
- libnsl=2.0.1=hd590300_0
- libopenblas=0.3.25=pthreads_h413a1c8_0
- libpng=1.6.39=h753d276_0
- libprotobuf=3.21.12=hfc55251_2
- libsqlite=3.44.2=h2797004_0
- libssh2=1.11.0=h0841786_0
- libstdcxx-ng=13.2.0=h7e041cc_3
- libuuid=2.38.1=h0b41bf4_0
- libxcrypt=4.4.36=hd590300_1
- libzlib=1.2.13=hd590300_5
- markdown=3.5.1=pyhd8ed1ab_0
- markupsafe=2.1.3=py311h459d7ec_1
- multidict=6.0.4=py311h459d7ec_1
- nccl=2.19.4.1=h0800d71_0
- ncurses=6.4=h59595ed_2
- numpy=1.26.3=py311h64a7726_0
- oauthlib=3.2.2=pyhd8ed1ab_0
- ocl-icd=2.3.1=h7f98852_0
- ocl-icd-system=1.0.0=1
- openmm=8.1.0=py311h6f6ebe4_1
- openssl=3.2.0=hd590300_1
- opt_einsum=3.3.0=pyhc1e730c_2
- packaging=23.2=pyhd8ed1ab_0
- pip=23.3.2=pyhd8ed1ab_0
- protobuf=4.21.12=py311hcafe171_0
- pyasn1=0.5.1=pyhd8ed1ab_0
- pyasn1-modules=0.3.0=pyhd8ed1ab_0
- pycparser=2.21=pyhd8ed1ab_0
- pyjwt=2.8.0=pyhd8ed1ab_0
- pyopenssl=23.3.0=pyhd8ed1ab_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.11.7=hab00c5b_1_cpython
- python-flatbuffers=23.5.26=pyhd8ed1ab_0
- python_abi=3.11=4_cp311
- pyu2f=0.1.5=pyhd8ed1ab_0
- re2=2023.03.02=h8c504da_0
- readline=8.2=h8228510_1
- requests=2.31.0=pyhd8ed1ab_0
- requests-oauthlib=1.3.1=pyhd8ed1ab_0
- rsa=4.9=pyhd8ed1ab_0
- scipy=1.11.4=py311h64a7726_0
- setuptools=69.0.3=pyhd8ed1ab_0
- six=1.16.0=pyh6c4a22f_0
- snappy=1.1.10=h9fff704_0
- tensorboard=2.13.0=pyhd8ed1ab_0
- tensorboard-data-server=0.7.0=py311h63ff55d_1
- tensorflow=2.13.1=cuda112py311h693fce6_1
- tensorflow-base=2.13.1=cuda112py311h8bdbb6c_1
- tensorflow-estimator=2.13.1=cuda112py311h0d913ca_1
- termcolor=2.4.0=pyhd8ed1ab_0
- tk=8.6.13=noxft_h4845f30_101
- typing_extensions=4.5.0=pyha770c72_0
- tzdata=2023d=h0c530f3_0
- urllib3=2.1.0=pyhd8ed1ab_0
- werkzeug=3.0.1=pyhd8ed1ab_0
- wheel=0.42.0=pyhd8ed1ab_0
- wrapt=1.16.0=py311h459d7ec_0
- xz=5.2.6=h166bdaf_0
- yarl=1.9.3=py311h459d7ec_0
- zipp=3.17.0=pyhd8ed1ab_0
- zlib=1.2.13=hd590300_5
- zstd=1.5.5=hfc55251_0
prefix: /home/jd/mambaforge/envs/openmmtensorflow
What precisely needs to be set in these two fields?
CMAKE_BUILD_TYPE
CUDA_SDK_ROOT_DIR
To clarify, I have created a build dir in /code/openmm/openmm_plugins/openmm-tensorflow/build after just cloning the repository.
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