Add auto-detecting parser for NetMHCpan output#176
Merged
Conversation
Add parse_netmhcpan_stdout() that reads the header line to detect the column layout instead of requiring the caller to pick a version-specific parser. Supports NetMHCpan 2.8, 3.0, 4.0 (BA and EL), and 4.1 (BA and EL). Logs the detected version via the standard logging module.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
parse_netmhcpan_stdout()that reads the header line between dash separators to auto-detect the column layout, eliminating the need for callers to pick a version-specific parserlogging.infoTest plan