Repositories list

• intermine

  Public
  A powerful open source data warehouse system

  pythonjavaapi+ 17open-sourceclojureopensourcebioinformaticsgenomicsgeneticsclojurescript+ 10

  Java

  •

  Other

  •349•267•218•3•Updated Jan 2, 2026Jan 2, 2026

• intermine-ws-python

  Public
  InterMine Client library in Python

  pythonbioinformaticsgenomics

  Python

  •

  BSD 2-Clause "Simplified" License

  •34•7•11•6•Updated Nov 22, 2025Nov 22, 2025

• biohackathon-25-sparql-services

  Public
  Hacking towards services for BlueGenes on top of QLever

  TypeScript

  •0•0•0•0•Updated Sep 20, 2025Sep 20, 2025

• bluegenes

  Public
  A friendly next-generation interface for Genomic data discovery powered by InterMine

  clojuregenomicsclojurescript+ 2cljsintermine

  Clojure

  •

  Other

  •59•76•142•3•Updated Jan 26, 2025Jan 26, 2025

• humanmine-bio-sources

  Public

  intermine/humanmine-bio-sources’s past year of commit activity
  Data sources for HumanMine

  Java

  •3•1•2•2•Updated Oct 12, 2024Oct 12, 2024

• docker-intermine-gradle

  Public
  Docker for InterMine

  Shell

  •

  GNU Lesser General Public License v2.1

  •19•5•6•2•Updated Mar 24, 2024Mar 24, 2024

• im-tables-3

  Public
  clojurescript library to display and manipulate intermine query results on a webpage

  intermine

  Clojure

  •

  GNU Lesser General Public License v2.1

  •5•5•17•9•Updated Jul 9, 2023Jul 9, 2023

• intermine-scripts

  Public
  All scripts that used to be in the main intermine repository in bio/scripts and intermine/scripts

  PLpgSQL

  •

  GNU Lesser General Public License v2.1

  •10•2•5•1•Updated Mar 13, 2023Mar 13, 2023

• intermine_cloud

  Public
  repo for cloud infrastructure

  Python

  •

  GNU Lesser General Public License v2.1

  •1•3•0•37•Updated Mar 6, 2023Mar 6, 2023

• im-docs

  Public
  Documentation for the InterMine project

  JavaScript

  •

  MIT License

  •28•5•1•31•Updated Mar 5, 2023Mar 5, 2023

• sequence-alignment-service

  Public
  Small sequence alignment service to be used in combination with the Multiple Sequence Alignment viewer

  JavaScript

  •2•0•0•3•Updated Mar 3, 2023Mar 3, 2023

• intermine-user-docs

  Public
  Documentation for using an InterMine webapp.

  JavaScript

  •

  GNU Lesser General Public License v3.0

  •8•3•0•22•Updated Jan 27, 2023Jan 27, 2023

• bluegenes-tool-test

  Public
  STOP! THIS TOOL IS FOR BLUEGENES INTERNAL DEVELOPER USE.

  JavaScript

  •

  MIT License

  •0•0•0•12•Updated Jan 7, 2023Jan 7, 2023

• bluegenes-tool-homology

  Public
  JavaScript

  •

  MIT License

  •2•2•0•13•Updated Jan 7, 2023Jan 7, 2023

• bluegenes-protein-tissue-localisation

  Public
  bluegenes-tool

  JavaScript

  •

  MIT License

  •2•0•1•14•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-human-tissue-expression-visualizer

  Public
  bluegenes-tool

  JavaScript

  •

  MIT License

  •2•0•1•14•Updated Jan 6, 2023Jan 6, 2023

• generator-bluegenes-tool

  Public
  Scaffold generator for BlueGenes tools

  JavaScript

  •

  MIT License

  •8•5•3•10•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-interaction-network

  Public
  bluegenes-tool

  JavaScript

  •

  MIT License

  •1•0•7•21•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-pathway-visualizer

  Public
  bluegenes-tool

  JavaScript

  •

  MIT License

  •1•0•5•21•Updated Jan 6, 2023Jan 6, 2023

• bluegenes-go-concept-relation

  Public
  bluegenes-tool

  JavaScript

  •

  MIT License

  •5•0•7•21•Updated Jan 5, 2023Jan 5, 2023

• identifiers-widget

  Public
  embeddable js widget to display identifiers.org info on your page

  JavaScript

  •

  Other

  •1•1•3•17•Updated Jan 5, 2023Jan 5, 2023

• im-tables

  Public
  Dynamic Result Table Library

  CoffeeScript

  •

  Other

  •26•10•35•25•Updated Dec 30, 2022Dec 30, 2022

• imjs

  Public
  InterMine Generic WebService Client Library

  JavaScript

  •

  Other

  •11•8•12•15•Updated Dec 30, 2022Dec 30, 2022

• cross-repo-contributor-list

  Public
  JavaScript

  •

  MIT License

  •1•1•0•5•Updated Dec 11, 2022Dec 11, 2022

• intermine-ws-java

  Public
  Java client for InterMine

  javabioinformatics

  Java

  •1•2•2•1•Updated Dec 7, 2022Dec 7, 2022

• bluegenes-tool-cytoscape

  Public
  Thin wrapper around the cytoscape-intermine library to present intermine gene & protein interaction networks in bluegenes

  bluegenes-tool

  HTML

  •

  Other

  •0•1•1•7•Updated Dec 2, 2022Dec 2, 2022

• internships

  Public
  InterMine GSoC informational mini-site for gsoc mentors and students

  HTML

  •

  Apache License 2.0

  •12•12•2•1•Updated Oct 5, 2022Oct 5, 2022

• biotestmine

  Public
  An example InterMine - for demoing and testing

  Shell

  •20•5•3•0•Updated Aug 31, 2022Aug 31, 2022

• flymine

  Public
  FlyMine - an InterMine instance with Drosophila data

  Java

  •3•1•2•0•Updated Aug 26, 2022Aug 26, 2022

• camCHILDMine

  Public
  Java

  •1•1•0•1•Updated Aug 16, 2022Aug 16, 2022