Parser and annotation tools using the FAPROTAX database (Louca S. et al., 2016)
The FAPROTAX database is maintained by Stilianos Louca. Any use of the tools in this repository shall thus cite:
Louca, S., Parfrey, L.W., Doebeli, M. (2016) - Decoupling function and taxonomy in the global ocean microbiome. Science 353:1272-1277
📃 FAPROTAX comes with a user license that must be redistributed with the database itself.
For further information see FAPROTAX website.
- Notes on the parser
- See "prototype" folder for Perl scripts