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Bioconductor failure and risk of deprecation

Status: Open.

#125 In saezlab/OmnipathR;

· lshep opened on Jan 6, 2026

Incompatibility with httr2 1.2.2?

Status: Open.

#124 In saezlab/OmnipathR;

· bbimber opened on Dec 28, 2025

Generating goslim fails due to curl error

Status: Open.

#123 In saezlab/OmnipathR;

· wudustan opened on Aug 14, 2025

curated_ligand_receptor_interactions() failing

Status: Open.

#122 In saezlab/OmnipathR;

· annajbott opened on Aug 1, 2025

map_int() error

Status: Open.

#121 In saezlab/OmnipathR;

· gabrigammal opened on Aug 1, 2025

failed to download

Status: Open.

#117 In saezlab/OmnipathR;

· Admitabc opened on Jan 10, 2025

Changing directory path for omnipathR Installation

questionA user question or anything not obviously bugA user question or anything not obviously bug

Status: Open.

#115 In saezlab/OmnipathR;

· min0609 opened on Dec 20, 2024

<code>kegg_pathway_annotations</code> fails with uninformative error

Status: Open.

#113 In saezlab/OmnipathR;

· danhalligan-la opened on Nov 3, 2024

Parallelization error when optimizing parameters for NicheNet

Status: Open.

#105 In saezlab/OmnipathR;

· tkapello opened on Aug 1, 2024

kegg_pathways_download returns fewer pathways

questionA user question or anything not obviously bugA user question or anything not obviously bug

Status: Open.

#102 In saezlab/OmnipathR;

· cchen22 opened on Jun 27, 2024

wrong TGFB1-SMAD7 interaction

Status: Open.

#98 In saezlab/OmnipathR;

· adugourd opened on Feb 22, 2024

Error when Testing the pipeline

Status: Open.

#89 In saezlab/OmnipathR;

· Mirable8me opened on Oct 19, 2023