List view

adapt argument parser types

feature (planned)

Status: Closed (completed).

#81 In seqan/lambda;

· by h-2 was closed on Dec 23, 2016

choose proper default values

Status: Closed (completed).

#82 In seqan/lambda;

· by h-2 was closed on Jan 6, 2017

document features from seqan 2.3

Status: Closed (completed).

#83 In seqan/lambda;

· by h-2 was closed on Dec 23, 2016

SIMDfy alignment process

feature (planned)

Status: Closed (completed).

#58 In seqan/lambda;

· by h-2 was closed on Nov 23, 2016

Species annotation part 1

feature (planned)

Status: Closed (completed).

#63 In seqan/lambda;

· by h-2 was closed on Nov 21, 2016

divide by zero in adaptive seeding

bug

Status: Closed (completed).

#66 In seqan/lambda;

· by h-2 was closed on Sep 6, 2016

Support for reference sequences longer than 65535

feature (planned)

Status: Closed (completed).

#70 In seqan/lambda;

· by boulund was closed on Nov 23, 2016

species annotation part 3

feature (planned)

Status: Closed (completed).

#77 In seqan/lambda;

· by h-2 was closed on Dec 22, 2016

underflow on query positions

bug

Status: Closed (completed).

#80 In seqan/lambda;

· by h-2 was closed on Dec 8, 2016

change sam/bam tags

Status: Closed (completed).

#79 In seqan/lambda;

· by h-2 was closed on Dec 23, 2016

use bidirectional fm-index

feature (planned)

Status: Closed (completed).

#74 In seqan/lambda;

· by h-2 was closed on Jan 6, 2017

check seqan macros

bug

Status: Closed (completed).

#84 In seqan/lambda;

· by h-2 was closed on Jan 6, 2017