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@veg

iGEM/UCSD evolutionary biology and bioinformatics group

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  1. hyphy hyphy Public

    HyPhy: Hypothesis testing using Phylogenies

    HyPhy 247 70

  2. hivtrace hivtrace Public

    JavaScript 25 15

  3. phylotree.js phylotree.js Public

    Interactive viewer of phylogenetic trees

    JavaScript 193 79

Repositories

Showing 10 of 101 repositories
  • hivtrace-viz Public
    veg/hivtrace-viz’s past year of commit activity
    JavaScript 10 11 0 2 Updated Jan 7, 2026
  • phylotree.js Public

    Interactive viewer of phylogenetic trees

    veg/phylotree.js’s past year of commit activity
    JavaScript 193 MIT 79 0 0 Updated Jan 7, 2026
  • cawlign Public
    veg/cawlign’s past year of commit activity
    C++ 3 MIT 4 4 0 Updated Jan 6, 2026
  • hyphy-readmes Public
    veg/hyphy-readmes’s past year of commit activity
    HyPhy 1 0 0 0 Updated Jan 6, 2026
  • hyphy Public

    HyPhy: Hypothesis testing using Phylogenies

    veg/hyphy’s past year of commit activity
    HyPhy 247 70 13 0 Updated Jan 5, 2026
  • hyphy-analyses Public

    HyPhy standalone analyses

    veg/hyphy-analyses’s past year of commit activity
    PostScript 51 MIT 19 47 0 Updated Jan 5, 2026
  • datamonkey-js-server Public
    veg/datamonkey-js-server’s past year of commit activity
    JavaScript 3 7 1 3 Updated Dec 29, 2025
  • CAPHEINE Public

    Automated evolutionary annotation of existing datasets using Nextflow

    veg/CAPHEINE’s past year of commit activity
    Nextflow 0 MIT 0 7 2 Updated Dec 20, 2025
  • datamonkey-js Public

    Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

    veg/datamonkey-js’s past year of commit activity
    JavaScript 10 9 1 3 Updated Dec 16, 2025
  • DRHIP Public

    Data Reduction for HyPhy with Inference Processing. A toolkit for analyzing and summarizing HyPhy evolutionary selection analysis results

    veg/DRHIP’s past year of commit activity
    Python 0 MIT 1 1 0 Updated Dec 12, 2025
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