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…ousekeeping Updated TODOs across animal module code.
…els_overview abiotic and hydrology models overview updated
updates: - [github.com/astral-sh/ruff-pre-commit: v0.4.10 → v0.5.0](astral-sh/ruff-pre-commit@v0.4.10...v0.5.0) - [github.com/pre-commit/mirrors-mypy: v1.10.0 → v1.10.1](pre-commit/mirrors-mypy@v1.10.0...v1.10.1)
…te-config [pre-commit.ci] pre-commit autoupdate
…-layerstructure-functionality Adopt extended LayerStructure functionality
…new tests to properly use the new topsoil index.
…mphrehension rather than hardcoding
…ate environmental factors
…hould-average-abiotic-quantities-over-relevant-soil-layers 532 litter model should average abiotic quantities over relevant soil layers
updates: - [github.com/astral-sh/ruff-pre-commit: v0.5.2 → v0.5.6](astral-sh/ruff-pre-commit@v0.5.2...v0.5.6) - [github.com/pre-commit/mirrors-mypy: v1.10.1 → v1.11.1](pre-commit/mirrors-mypy@v1.10.1...v1.11.1)
…rialCollegeLondon/virtual_rainforest into pre-commit-ci-update-config
…te-config [pre-commit.ci] pre-commit autoupdate
…r-nitrogen Added tracking of litter nitrogen
updates: - [github.com/astral-sh/ruff-pre-commit: v0.5.6 → v0.6.2](astral-sh/ruff-pre-commit@v0.5.6...v0.6.2) - [github.com/pre-commit/mirrors-mypy: v1.11.1 → v1.11.2](pre-commit/mirrors-mypy@v1.11.1...v1.11.2)
…te-config [pre-commit.ci] pre-commit autoupdate
Move setup step to init in `Abiotic` and `AbioticSimple` models
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davidorme
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Sep 6, 2024
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As discussed, release to make newer functionality installable for test users.
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Description
Release branch to ensure that the downloadable version of the code isn't so outdated that our usage tutorial doesn't actually work (see #544)