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Filter reads for gc bias (mapq and interval) Build and Test #401: Pull request #2030 synchronize by bwlang
12m 16s bwlang:filter_gc_bias
bwlang:filter_gc_bias
12m 16s
Add molecular position stratification to CollectSamErrorMetrics Build and Test #400: Pull request #2035 synchronize by yfarjoun
10m 57s yfarjoun:yf_add_end_of_insert_stratifier
yfarjoun:yf_add_end_of_insert_stratifier
10m 57s
switches from short to int for physical locations (avoiding overflow … Build and Test #399: Commit fc0b084 pushed by nh13
11m 13s master
master
11m 13s
switches from short to int for physical locations (avoiding overflow and inaccurate markdups) Build and Test #398: Pull request #2034 synchronize by bwlang
11m 15s bwlang:optical_dup_fix
bwlang:optical_dup_fix
11m 15s
Add molecular position stratification to CollectSamErrorMetrics Build and Test #397: Pull request #2035 synchronize by yfarjoun
12m 29s yfarjoun:yf_add_end_of_insert_stratifier
yfarjoun:yf_add_end_of_insert_stratifier
12m 29s
Add molecular position stratification to CollectSamErrorMetrics Build and Test #396: Pull request #2035 synchronize by yfarjoun
11m 3s yfarjoun:yf_add_end_of_insert_stratifier
yfarjoun:yf_add_end_of_insert_stratifier
11m 3s
Add molecular position stratification to CollectSamErrorMetrics Build and Test #395: Pull request #2035 synchronize by yfarjoun
11m 57s yfarjoun:yf_add_end_of_insert_stratifier
yfarjoun:yf_add_end_of_insert_stratifier
11m 57s
Add molecular position stratification to CollectSamErrorMetrics Build and Test #394: Pull request #2035 opened by yfarjoun
10m 55s yfarjoun:yf_add_end_of_insert_stratifier
yfarjoun:yf_add_end_of_insert_stratifier
10m 55s
switches from short to int for physical locations (avoiding overflow and inaccurate markdups) Build and Test #393: Pull request #2034 synchronize by bwlang
11m 26s bwlang:optical_dup_fix
bwlang:optical_dup_fix
11m 26s
switches from short to int for physical locations (avoiding overflow and inaccurate markdups) Build and Test #392: Pull request #2034 opened by bwlang
12m 24s bwlang:optical_dup_fix
bwlang:optical_dup_fix
12m 24s
added parallelization to the actual cross-checking part of Crosscheck… Build and Test #391: Pull request #2033 opened by yfarjoun
10m 56s yfarjoun:yf_use_threads_in_crosscheck
yfarjoun:yf_use_threads_in_crosscheck
10m 56s
Add draft CONTRIBUTING.md file. Build and Test #390: Pull request #2031 opened by yfarjoun
11m 2s yfarjoun:yf_contributing
yfarjoun:yf_contributing
11m 2s
Filter reads for gc bias (mapq and interval) Build and Test #389: Pull request #2030 synchronize by bwlang
10m 58s bwlang:filter_gc_bias
bwlang:filter_gc_bias
10m 58s
Filter reads for gc bias (mapq and interval) Build and Test #388: Pull request #2030 opened by bwlang
11m 0s bwlang:filter_gc_bias
bwlang:filter_gc_bias
11m 0s
Address CVE (#2022) Build and Test #387: Commit 1dd3cc5 pushed by tfenne
11m 30s master
master
11m 30s
Attempt at preventing MBA to resort and try again when input is not a… Build and Test #386: Commit be13abb pushed by kockan
13m 53s master
master
13m 53s
Protect CollectRnaSeqMetrics from pair orientation assert (#2027) Build and Test #385: Commit e20397b pushed by kockan
13m 25s master
master
13m 25s
protect collect rnaseqmetrics from pair orientation assert Build and Test #384: Pull request #2027 opened by yfarjoun
13m 23s yfarjoun:yf_protect_collectRNAseqmetrics_from_pairOrientation_assert
yfarjoun:yf_protect_collectRNAseqmetrics_from_pairOrientation_assert
13m 23s
Ensure that the CREATE_INDEX option of FilterVcf is respected in all … Build and Test #383: Commit b976447 pushed by tfenne
18m 59s master
master
18m 59s
Properly plumbs the CREATE_INDEX logic in FilterVcf. Build and Test #382: Pull request #2025 synchronize by yfarjoun
12m 45s yfarjoun:yf_enable_no_index_in_filterVcf
yfarjoun:yf_enable_no_index_in_filterVcf
12m 45s
Properly plumbs the CREATE_INDEX logic in FilterVcf. Build and Test #381: Pull request #2025 synchronize by yfarjoun
12m 44s yfarjoun:yf_enable_no_index_in_filterVcf
yfarjoun:yf_enable_no_index_in_filterVcf
12m 44s
Properly plumbs the CREATE_INDEX logic in FilterVcf. Build and Test #380: Pull request #2025 opened by yfarjoun
13m 27s yfarjoun:yf_enable_no_index_in_filterVcf
yfarjoun:yf_enable_no_index_in_filterVcf
13m 27s
Prevent MBA from re-sorting input on error if the input is a pipe Build and Test #379: Pull request #2024 opened by yfarjoun
14m 3s yfarjoun:yf_avoid_resorting_on_non-regular_files
yfarjoun:yf_avoid_resorting_on_non-regular_files
14m 3s
Address CVE Build and Test #378: Pull request #2022 opened by bbimber
12m 51s bbimber:cve
bbimber:cve
12m 51s
Yf make revert sam robust to errant XQ and XB tags (#2021) Build and Test #377: Commit 01158a7 pushed by kockan
13m 17s master
master
13m 17s